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TR8 (version 0.9.13)

A Tool for Downloading Functional Traits Data for Plant Species

Description

Plant ecologists often need to collect "traits" data about plant species which are often scattered among various databases: TR8 contains a set of tools which take care of automatically retrieving some of those functional traits data for plant species from publicly available databases (Biolflor, The Ecological Flora of the British Isles, LEDA traitbase, Ellenberg values for Italian Flora, Mycorrhizal intensity databases, Catminat). The TR8 name, inspired by "car plates" jokes, was chosen since it both reminds of the main object of the package and is extremely short to type.

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Version

Install

install.packages('TR8')

Monthly Downloads

228

Version

0.9.13

License

GPL (>= 2)

Issues

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Stars

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Maintainer

Gionata Bocci

Last Published

March 22nd, 2015

Functions in TR8 (0.9.13)

ECOFLORA_df

ECOFLORA_df: local lookup table for Ecoflora species' url(s)
biolflor_lookup

biolflor_lookup
tr8_config

tr8_config a GUI to configure TR8 package.
traits_eco

Set of functional traits to be retrieved by Ecoflora.
Tr8-class

Class "Tr8"
leda_lookup

List with reference variables needed to download traits from LEDA Traitbase
column_list

column_list
TR8-package

TR8: a tool for retrieving functional traits data for plant species.
list_of_traits_Biolflor

list_of_traits_Biolflor
local_storage

A utility to storage a local copy of traits data
leda_download_to_local_directory

A utility to download a local copy of the LEDA data files.
available_tr8

A dataframe containing the traits available for download.
tr8

tr8: retrieving functional traits data from various databases.
pignatti

pignatti
available_traits

available_traits shows which traits are available for download