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TR8 (version 0.9.14)

A Tool for Downloading Functional Traits Data for Plant Species

Description

Plant ecologists often need to collect "traits" data about plant species which are often scattered among various databases: TR8 contains a set of tools which take care of automatically retrieving some of those functional traits data for plant species from publicly available databases (Biolflor, The Ecological Flora of the British Isles, LEDA traitbase, Ellenberg values for Italian Flora, Mycorrhizal intensity databases, Catminat, BROT, PLANTS, Jepson Flora Project). The TR8 name, inspired by "car plates" jokes, was chosen since it both reminds of the main object of the package and is extremely short to type.

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Version

Install

install.packages('TR8')

Monthly Downloads

228

Version

0.9.14

License

GPL (>= 2)

Issues

Pull Requests

Stars

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Maintainer

Gionata Bocci

Last Published

March 31st, 2016

Functions in TR8 (0.9.14)

ECOFLORA_df

ECOFLORA_df: local lookup table for Ecoflora species' url(s)
leda_lookup

List with reference variables needed to download traits from LEDA Traitbase
leda_download_to_local_directory

A utility to download a local copy of the LEDA data files.
available_traits

available_traits shows which traits are available for download
ref_PLANTS

ref_PLANTS
traits_eco

Set of functional traits to be retrieved by Ecoflora.
list_of_traits_Biolflor

list_of_traits_Biolflor
biolflor_lookup

biolflor_lookup
Tr8-class

Class "Tr8"
tr8_config

tr8_config a GUI to configure TR8 package.
local_storage

A utility to storage a local copy of traits data
available_tr8

A dataframe containing the traits available for download.
pignatti

pignatti
column_list

column_list
traits_special_Biolflor

traits_special_Biolflor
traits_pollen_Biolflor

traits_pollen_Biolflor
tr8

tr8: retrieving functional traits data from various databases.
TR8-package

TR8: a tool for retrieving functional traits data for plant species.