TimeMachine (version 1.0)

full.transitions: Full Transition Matrix Computation

Description

Computes the full transition matrix from a given unitary transition matrix.

Usage

full.transitions(unitary.transitions, loci)

Arguments

unitary.transitions

Square matrix of order 2 specifying per-locus transition probabilities

loci

Number of loci

Value

• A square matrix of order 2^loci specifying all transition probabilities.