Learn R Programming
⚠️There's a newer version (2.5.0) of this package.Take me there.

UniprotR (version 1.0.2)

Retrieving Information of Proteins from Uniprot

Description

Connect to Uniprot to retrieve information about proteins using their accession number such information could be name or taxonomy information.

Copy Link

Version

Install

install.packages('UniprotR')

Monthly Downloads

577

Version

1.0.2

License

GPL-3

Maintainer

Mohamed Soudy

Last Published

August 6th, 2019

Functions in UniprotR (1.0.2)

GetTaxaidentifier

Connect and parse UniProt protein taxonomic information.
PlotSummaryInfo

Connect and parse UniProt information.
PlotProteinTaxa

Connect and parse UniProt information.
GetPathology_Biotech

Connect and parse UniProt Pathology_Biotech information.
UniprotR

UniprotR: A package for retrieving proteins information from UniProt.
GetProteinAnnontate

Connect and parse UniProt information.
PlotProteinGO_cel

Connect and parse UniProt information.
GetProteinInteractions

Connect and parse UniProt protein Interactions information.
GetPublication

Connect and parse UniProt Publication about a protein information.
PlotProteinGO_molc

Connect and parse UniProt information.
GetFamily_Domains

Connect and parse UniProt Family Domains information.
GetProteinFunction

Connect and parse UniProt Protein Function information.
GetProteinGOInfo

Connect and parse UniProt proteins gene ontology information.
GetTaxonomic_lineage

Connect and parse UniProt Taxonomic_lineage information.
HandleBadRequests

Handle bad requests This Function is used to handle possible errors when trying to get url response.
PlotProteinGO_bio

Connect and parse UniProt information.
GetproteinNetwork

Connect and parse stringdb information.
GetSubcellular_location

Connect and parse UniProt protein Subcellular location information.
GetSequences

Connect and parse UniProt Sequences information.
GetpdbStructure

Connect and parse UniProt information.
GetCross_references_Information

Connect and parse UniProt Cross-references information.
GetAccessionList

Connect and parse UniProt information.
GetNamesTaxa

Connect and parse UniProt Names Taxa information.
GetPTM_Processsing

Connect and parse UniProt PTM_Processsing information.
GetExpression

Connect and parse UniProt Expression information.
GetMiscellaneous

Connect and parse UniProt Miscellaneous information.
GetGeneral_Information

Connect and parse UniProt General Information.
ConstructLocTree

Connect and parse UniProt information.
ConvertID

Connect and parse UniProt database identifiers information.