UniprotR (version 1.0.2)

ConvertID: Connect and parse UniProt database identifiers information.

Description

The function is work to convert the UniProtKB AC/ID to any database identifiers available by the UniProtKB. For more information about available database identifiers see https://www.uniprot.org/help/api_idmapping.

Usage

ConvertID(ProteinAccList , ID_from = "ACC+ID" , ID_to = NULL
 , directorypath = NULL)

Arguments

ProteinAccList

Vector of UniProt Accession/s

ID_from

string of database identifier abbreviation, from which the Accession/ID will be converted

ID_to

string of database identifier abbreviation, to which the Accession/ID will be converted. default is all database identifier available in UniProtKB

directorypath

path to save excel file containig results returened by the function.

Value

DataFrame where column one contains the Accession/ID before conversion and other columns contains the Accession/ID after conversion

Examples

# NOT RUN {
Obj <- ConvertID("O14520" , "ACC+ID" , "EMBL")

# }