UniprotR (version 2.1.0)

GetTaxonomic_lineage: Connect and parse UniProt Taxonomic_lineage information.

Description

The function is work to retrieve Taxonomic_lineage data from UniProt for a list of proteins accessions. For more information about what included in the Taxonomic_lineage data see https://www.uniprot.org/help/uniprotkb_column_names.

Usage

GetTaxonomic_lineage(ProteinAccList, directorypath = NULL)

Arguments

ProteinAccList

Vector of UniProt Accession/s

directorypath

path to save excel file containig results returened by the function.

Value

DataFrame where rows names are the accession and columns contains the information retrieved from the UniProt

Examples

# NOT RUN {
Obj <- GetTaxonomic_lineage("O14520")

# }