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abctools (version 0.2-2)

Tools for ABC analyses

Description

Tools for approximate Bayesian computation including summary statistic selection and assessing coverage

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Version

Install

install.packages('abctools')

Monthly Downloads

360

Version

0.2-2

License

GPL (>= 2)

Maintainer

Matt Nunes

Last Published

December 18th, 2013

Functions in abctools (0.2-2)

combmat

table of combinations
nn.ent

Works out entropy of a sample.
pls.abc

ABC inference using PLS components computed from data.
stage2

stage2
abctools-package

Tools for ABC analyses
mincrit

Summary statistics selection by minimizing a posterior sample measure.
coal

Examples of coalescent data
rsse

Simulation error measures.
selectsumm

Generic function for selecting summary statistics in ABC inference.
mc.ci

Diagnostic plots for model choice coverage output
semiauto.abc

Performs semi-automatic ABC based on summary statistics regression.
cov.pi

Coverage property diagnostics
AS.select

Summary statistics selection using approximate sufficiency.
saABC

Summary statistic construction by semi-automatic ABC
AS.test

Test for relative approximate sufficiency between two posterior samples.