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abctools (version 1.1.7)
Tools for ABC Analyses
Description
Tools for approximate Bayesian computation including summary statistic selection and assessing coverage. See Nunes and Prangle (2015)
and Rodrigues, Prangle and Sisson (2018)
.
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Install
install.packages('abctools')
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485
Version
1.1.7
License
GPL (>= 2)
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6
Forks
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Repository
https://github.com/dennisprangle/abctools
Maintainer
Matt Nunes
Last Published
September 18th, 2023
Functions in abctools (1.1.7)
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saABC
Summary statistic construction by semi-automatic ABC
combmat
table of combinations
recalibrationABC
ABC inference with a recalibration adjustment
semiauto.abc
Performs semi-automatic ABC based on summary statistics regression.
coal
Examples of coalescent data
mincrit
Summary statistics selection by minimizing a posterior sample measure.
AS.test
Test for relative approximate sufficiency between two posterior samples.
rsse
Simulation error measures.
cov.pi
Coverage property diagnostics
stage2
stage2
selectsumm
Generic function for selecting summary statistics in ABC inference.
nn.ent
Works out entropy of a sample.
AS.select
Summary statistics selection using approximate sufficiency.
abctools-package
Tools for ABC analyses
mc.ci
Diagnostic plots for model choice coverage output