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abctools (version 0.3-2)

Tools for ABC analyses

Description

Tools for approximate Bayesian computation including summary statistic selection and assessing coverage

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Version

Install

install.packages('abctools')

Monthly Downloads

360

Version

0.3-2

License

GPL (>= 2)

Maintainer

Matt Nunes

Last Published

June 25th, 2014

Functions in abctools (0.3-2)

combmat

table of combinations
AS.test

Test for relative approximate sufficiency between two posterior samples.
mc.ci

Diagnostic plots for model choice coverage output
mincrit

Summary statistics selection by minimizing a posterior sample measure.
abctools-package

Tools for ABC analyses
rsse

Simulation error measures.
nn.ent

Works out entropy of a sample.
saABC

Summary statistic construction by semi-automatic ABC
coal

Examples of coalescent data
selectsumm

Generic function for selecting summary statistics in ABC inference.
pls.abc

ABC inference using PLS components computed from data.
AS.select

Summary statistics selection using approximate sufficiency.
stage2

stage2
cov.pi

Coverage property diagnostics
semiauto.abc

Performs semi-automatic ABC based on summary statistics regression.