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abctools (version 1.0.2)
Tools for ABC Analyses
Description
Tools for approximate Bayesian computation including summary statistic selection and assessing coverage.
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Install
install.packages('abctools')
Monthly Downloads
529
Version
1.0.2
License
GPL (>= 2)
Issues
0
Pull Requests
0
Stars
6
Forks
3
Repository
http://github.com/dennisprangle/abctools
Maintainer
Matt Nunes
Last Published
May 29th, 2015
Functions in abctools (1.0.2)
Search functions
combmat
table of combinations
selectsumm
Generic function for selecting summary statistics in ABC inference.
mincrit
Summary statistics selection by minimizing a posterior sample measure.
AS.test
Test for relative approximate sufficiency between two posterior samples.
coal
Examples of coalescent data
rsse
Simulation error measures.
AS.select
Summary statistics selection using approximate sufficiency.
stage2
stage2
nn.ent
Works out entropy of a sample.
saABC
Summary statistic construction by semi-automatic ABC
abctools-package
Tools for ABC analyses
mc.ci
Diagnostic plots for model choice coverage output
cov.pi
Coverage property diagnostics
semiauto.abc
Performs semi-automatic ABC based on summary statistics regression.