acmwrapall: acmwrapall (acm warp all)
Description
This function takes only take two required parameters. This
function calls the function call_erra, call_acm,
call_bablbs, call_gd1, call_gd2, and clusters with their
default arguments.
Usage
acmwrapall(replic, patient, work_dir = ".", dnum = 1, delete = FALSE)
Arguments
replic
is the full name of the file containing the
rflp result of replicate strains
patient
is the full name of the file containing
the rflp result of strains in patients
work_dir
is where the datasets should be stored
delete
logical value indicating if you want to
delete any pre-existing files. Default is FALSE
References
Salamon et al. (1998) Accommodating Error Analysis in
Comparison and Clustering of Molecular Fingerprints.
Emerging Infectious Diseases Vol. 4, No. 2, April-June 1998