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agricolae (version 1.0-1)

Statistical Procedures for Agricultural Research

Description

These functions are currently utilized by the International Potato Center Research (CIP), the Statistics and Informatics Instructors and the Students of the Universidad Nacional Agraria La Molina Peru, and the Specialized Master in "Bosques y Gesti�n de Recursos Forestales" (Forest Resource Management). This package contains functionality for the statistical analysis of experimental designs applied specially for field experiments in agriculture and plant breeding. Planning of field experiments: Lattice, factorial, RCBD, CRD, Latin Square, Greaco, BIB, Alpha design. Comparison of multi-location trials: AMMI (biplot and triplot), Stability. Comparison between treatments: LSD, HSD, Waller, Kruskal, Friedman, Durbin, Van Der Waerden. Resampling and simulation: resampling.model, simulation.model, Ecology: Indices Biodiversity, path analysis, Uniformity Soil: Index Smith's.

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Version

Install

install.packages('agricolae')

Monthly Downloads

32,502

Version

1.0-1

License

This software may be re-distributed freely and used for any non-commercial purpose under the GPL license.

Maintainer

Felipe Mendiburu

Last Published

October 22nd, 2023

Functions in agricolae (1.0-1)

Data of yield for nonparametrical stability analysis

Multiple comparisons: Tukey

The matrix zz of information is disturbed in three vectors x, y, z

Coefficient of the experiment variation

Order in rownames and colnames

Correlation of Kendall

Plotting the multiple comparison of means

Data for AMMI Analysis

Data evaluation of the disease overtime

Frequency Table of a Histogram

Interpolation for nonequidistant points in matrix

Selection of the best method for the dissimilarity distance calculation

Class intervals

Calculating the absolute or relative value of the AUDPC

Data of Bacterial wild (AUDPC) and soil

Multiple comparisons, "Least significant difference"

Durbin test and multiple comparison of treatments

Data Carolina III

Finding the largest decimal number from the elements of a vector or matrix

Correlation Coefficient

Completely Randomized Design

Descriptive measures of grouped data

Data of species trees. Pucallpa

agricolae-package

Statistical Procedures for Agricultural Research

Data clones from the LTVR population

Frequency table histogram

The polygon of frequency on the histogram

Randomized Balanced Incomplete Block Designs. BIB

Graeco - latin square design

Grouping the treatments averages in a comparison with a minimum value

Data for stability analysis

Plotting the standard error or standard deviance of a multiple comparison of means

Data of fr�jol

Friedman test and multiple comparison of treatments

Paracsho data biodiversity

Finding the Kurtosis coefficient

Discontinuous plotting

Plotting the ojiva from a histogram

Grain yield data of rice variety IR8

Multiple comparisons, Waller-Duncan

Data of soil analysis for 13 localities

North Carolina Designs I, II y III

Data Carolina II

Coefficient of the similarity matrix variation

Alpha design type (0,1)

Latin Square Design

Data AUDPC Comas - Oxapampa

resampling.model

Resampling for linear models

Stability analysis. SHUKLA'S STABILITY VARIANCE AND KANG'S

Data of potato yield in a different environment

Variance K, ties, Kendall

Data of Ralstonia population in clay soil

Mean on data frame in matrix

Nonadditivity model test

Data Line by tester

Finding the Variance Analysis of the Balanced Incomplete Block Design

Data for Friedman test

Class intervals for a histogram, the rule of Sturges

Randomizing a factorial in a block

Design in blocks for factorial pxq

Randomized Complete Block Design

Data for AMMI without repetition

Data of molecular markers

Multiple comparisons. The van der Waerden (Normal Scores)

Computations of Bayesian t-values for multiple comparisons

Data of cutting

stability.nonpar

Nonparametric stability analysis

Join class for histogram

Yield data of melon in a Latin square experiment

Finding the skewness coefficient

Data of yield in Huasahuasi

Ordering the treatments according to the multiple comparison

Matrix of similarity in binary data

Setting the last character of a chain

Data Carolina I

Data of native potato

Biodiversity Indices

Strip-Plot analysis

Omitting the rows or columns with missing observations of a matrix (NA)

Data of population bacterial wild: AUDPC

Data of precipitation

Correlation analysis. Methods of Pearson, Spearman and Kendall

Line x Tester Analysis

Normal curve on the histogram

simulation.model

Simulation of the linear model under normality

Data of sweetpotato yield

Resampling to find the optimal number of markers

Data for an analysis in split-plot

Factorial design k-factors with n-levels in blocks

Homologation of regressions

Data Glycoalkaloids

Statistics of data grouped by factors

Completing missing data of a matrix according to a model

Data growth of trees

Kruskal Wallis test and multiple comparison of treatments.

Uniformity soil. Smith's Index of Soil Heterogeneity

Data clones from the PLRV population

Data and analysis Mother and baby trials

Data Potato Wild

Data amendment Huanuco 2006

consensus of clusters

Cut tree of consensus

Calculates the absolute AUDPC of a table

groups of hclust

Data amendment Carhuaz 2006

Setting the last character of a chain

Data of potato, Heterosis

Data of Bacterial Wilt (AUDPC) and soil

Lattice designs

Analysis of the Partially Balanced Incomplete Block Design

Random generation by Montecarlo

Strip Plot Design

Data in greenhouse

Split Plot Design

Data for the analysis of carolina genetic design

Finding the Variance Analysis of the Augmented block Design

Augmented block design

plot.graph.freq

Multiple comparisons: Tukey

Multiple comparisons, group: "Least significant difference"

Test of Durbin and multiple comparison of treatments

Multiple comparisons, group: Tukey

Multiple comparisons, group: The van der Waerden (Normal Scores)

Computes the coefficient of skewness

summary.graph.freq

Frequency Table of a Histogram

Calculates the relative AUDPC of a table

Multiple comparisons. The van der Waerden (Normal Scores)

Duncan's new multiple range test

Correlation between groups of variables

The Friedman test

Durbin test and multiple comparison of treatments

Multiple comparisons, scheffe

Multiple comparisons "Least significant difference" LSD

Analysis of correlation. Methods of Pearson, Spearman and Kendall

Friedman Test and multiple comparison of treatments, group

Interpolation of a information matrix

Correlation between two variables

Student-Newman-Keuls (SNK)

Computes the coefficient of Kurtosis