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annmatrix (version 0.1.2)

Annotated Matrix: Matrices with Persistent Row and Column Annotations

Description

Implements persistent row and column annotations for R matrices. The annotations associated with rows and columns are preserved after subsetting, transposition, and various other matrix-specific operations. Intended use case is for storing and manipulating genomic datasets which typically consist of a matrix of measurements (like gene expression values) as well as annotations about rows (i.e. genomic locations) and annotations about columns (i.e. meta-data about collected samples). But 'annmatrix' objects are also expected to be useful in various other contexts.

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Install

install.packages('annmatrix')

Monthly Downloads

326

Version

0.1.2

License

GPL-2

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Maintainer

Karolis Koncevi<c4><8d>ius

Last Published

May 14th, 2023

Functions in annmatrix (0.1.2)

transpose

Transposing annmatrix Objects
subset

Subset annmatrix Objects
bind

Bind several annmatrix Objects Together
scale

Scaling and Centering of annmatrix Objects
print

Print annmatrix Object
annmatrix

annmatrix Objects and Basic Functionality
pca

Principal Component Analysis for annmatrix Objects
convert

Convert annmatrix Objects to and from Other Types
groupgenerics

Group Generic Functions for annmatrix Class
stack

Stack an annmatrix object
autocomplete

Auto Complete Functions for annmatrix Class
matrixgenerics

Matrix Generic Functions for annmatrix Class