groupgenerics

Ops.annmatrix

chooseOpsMethod.annmatrix

The functions listed here work under the hood and are almost never called by the user.

Implements persistent row and column annotations for R matrices. The annotations associated with rows and columns are preserved after subsetting, transposition, and various other matrix-specific operations. Intended use case is for storing and manipulating genomic datasets which typically consist of a matrix of measurements (like gene expression values) as well as annotations about rows (i.e. genomic locations) and annotations about columns (i.e. meta-data about collected samples). But 'annmatrix' objects are also expected to be useful in various other contexts.

Karolis Koncevi<c4><8d>ius

annmatrix

Annotated Matrix: Matrices with Persistent Row and Column
Annotations

Karolis Koncevičius

groupgenerics function

<dl><dt>e1, e2</dt>
<dd>annmatrix objects.</dd>
<dt>x, y</dt>
<dd>The objects being dispatched on by the group generic.</dd>
<dt>mx, my</dt>
<dd>The methods found for objects 'x' and 'y'.</dd>
<dt>cl</dt>
<dd>The call to the group generic.</dd>
<dt>reverse</dt>
<dd>A logical value indicating whether 'x' and 'y' are reversed from the way they were supplied to the generic.</dd></dl>

Arguments

Author

Group Generic Functions for annmatrix Class — groupgenerics

<dl>

<dt>e1, e2</dt>
<dd>annmatrix objects.</dd>


<dt>x, y</dt>
<dd>The objects being dispatched on by the group generic.</dd>


<dt>mx, my</dt>
<dd>The methods found for objects 'x' and 'y'.</dd>


<dt>cl</dt>
<dd>The call to the group generic.</dd>


<dt>reverse</dt>
<dd>A logical value indicating whether 'x' and 'y' are reversed from the way they were supplied to the generic.</dd>

</dl>

groupgenerics: Group Generic Functions for annmatrix Class

Description

Usage

Value

Arguments

Author