anota (version 1.20.0)

anotaDataSet: Sample data set for anota

Description

6 samples with data from 2 sample categories, both cytosolic (anotaDataT) and translational (anotaDataP) together with a sample class vector (anotaPhenoVec).

Usage

data(anotaDataSet)

Format

Each data matrix (anotaDataT and anotaDataP) has 1000 rows (1000 first identifiers from complete data set) and 6 columns (noAA or rich). The anotaPhenoVec vector contains the sample class of each sample and anotaDataT, anotaDataP and phenoVec follow the same order.

Source

Ingolia, NT et al. Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling. Science, 2009, 10;324(5924):218-23

Examples

##load data set
data(anotaDataSet)
##check dimensions
dim(anotaDataP)
head(anotaDataP)

dim(anotaDataT)
head(anotaDataT)

anotaPhenoVec