# ber v3.0

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## Batch Effects Removal

The functions in this package remove batch effects from microarrary normalized data. The expression levels of the genes are represented in a matrix where rows correspond to independent samples and columns to genes (variables). The batches are represented by categorical variables (objects of class factor). When further covariates of interest are available they can be used to remove efficiently the batch effects and adjust the data.

## Functions in ber

 Name Description ber_bg Batch Effects Removal using Bagging mean_centering mean_centering ber Batch Effects Removal standardization standardization combat_p parametric combat combat_np non-parametric combat No Results!