merge_template

Custom merge function to help users align their data with the template
datasets containing the variable location information for the Nightingale
figures. User datasets should contain the variables representing bubble color
and size, and a key column to merge rows with the template. The key column
should either be named "ukbb_id" and contain the UK Biobank Field ID for each
variable (e.g. "23474") or named "ckb_id" and contain the China Kadoorie
Biobank variable ID, (e.g. "nmr_bohbut").

Plotting package based on the grid system, combining elements of
a bubble plot and heatmap to conveniently display two numerical variables,
(represented by color and size) grouped by categorical variables on the x
and y axes. This is a useful alternative to a forest plot when the data can
be grouped in two dimensions, such as predictors x outcomes. It has
particular advantages for visualising the metabolic measures produced by
the 'Nightingale Health' metabolomics platform, and templates are included
for automatically generating figures from these datasets.

Ruth Boxall

bubbleHeatmap

Produces 'bubbleHeatmap' Plots for Visualising Metabolomics Data

Michael Holmes

Robin Walters

merge_template function

<dl><dt>data</dt>
<dd>User dataset</dd>
<dt>id</dt>
<dd>Name of key column, either "ukbb_id" or "ckb_id"</dd></dl>

Arguments

Merge Nightingale Figure Templates with User Data — merge_template

<dl>

<dt>data</dt>
<dd>User dataset</dd>


<dt>id</dt>
<dd>Name of key column, either "ukbb_id" or "ckb_id"</dd>

</dl>

merge_template: Merge Nightingale Figure Templates with User Data

Description

Usage

Value

Arguments

Examples