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bubbleHeatmap (version 0.1.1)

Produces 'bubbleHeatmap' Plots for Visualising Metabolomics Data

Description

Plotting package based on the grid system, combining elements of a bubble plot and heatmap to conveniently display two numerical variables, (represented by color and size) grouped by categorical variables on the x and y axes. This is a useful alternative to a forest plot when the data can be grouped in two dimensions, such as predictors x outcomes. It has particular advantages for visualising the metabolic measures produced by the 'Nightingale Health' metabolomics platform, and templates are included for automatically generating figures from these datasets.

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Version

Install

install.packages('bubbleHeatmap')

Monthly Downloads

235

Version

0.1.1

License

GPL-3

Maintainer

Ruth Boxall

Last Published

May 15th, 2023

Functions in bubbleHeatmap (0.1.1)

arrangePanels

Arrange Multiple bubbleHeatmap gTrees Inside a New Viewport.
formatData

Split Data Into Matrices and Reorder Rows and Columns.
cetp

Associations of Nightingale Health Metabolomics Panel with a Cholesterol Esterase Transfer Protein Genetic Risk Score in China Kadoorie Biobank
bubbleHMLegends

Build Legend Trees for bubbleHeatmap Plots
bubbleHeatmapList

Output List of bubbleHeatmap Plots.
merge_template

Merge Nightingale Figure Templates with User Data
getLayoutSizes

Recalculate Layout Sizes for bubbleHeatmap gTree
combinePanels

Combine Multiple Panels In A New gTree.
matchLayoutHeights

Match Viewport Layout Dimensions.
bubbleHeatmap

Generate bubbleHeatmap Plot Object
metabFigure

Create Nightingale Figure From Template
multiPlotInput

Arrange bubbleHeatmap Arguments in Lists for Building Multiple Plots.
widthDetails.bubbleHeatmap

Methods for determining the width/height of bubbleHeatmap plots and legends.
nightingaleTemplates

Nightingale Health Metabolomics Plot Template Format
metabFigurePlot

Arrange List of bubbleHeatmap Plots According to Preset Nightingale Template.