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catnet (version 1.10.0)

Categorical Bayesian Network Inference

Description

A package that handles discrete Bayesian network models and provides inference using the frequentist approach

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Version

Install

install.packages('catnet')

Monthly Downloads

81

Version

1.10.0

License

GPL (>= 2)

Maintainer

Nikolay Balov Peter Salzman psalzmanbstrochesteredu

Last Published

April 27th, 2011

Functions in catnet (1.10.0)

cnCatnetFromSif

Categorical Network from Simple Interaction File (SIF) and Bayesian Networks Interchange Format (BIF)
breast

Breast cancer data
cnCatnetFromEdges

catNetwork from Edges
cnCluster-method

Network Clustering
catNetworkEvaluate-class

Class "catNetworkEvaluate"
catNetworkDistance-class

Class "catNetworkDistance"
cnComplexity-method

Network Complexity
cnNodeLoglik

Node Log-likelihood
cnEdges-method

Network Edges
catNetwork-class

Class "catNetwork"
cnFindBIC-method

Find Network by BIC
cnCompare-method

Network Comparison
cnFind-method

Find Network by Complexity
cnLoglik-method

Sample Log-likelihood
cnMatEdges-method

Network Edge Matrix
alarm

The ALARM network
cnReorderNodes-method

Reorder Network Nodes
as.igraph-method

catNetwork to igraph
cnNodeSampleLoglik

Node Log-likelihood
novartis

Novartis multi-tissue data
cnOrder-method

Network Node Order
as.graph-methods

Graph from catNetwork
catnet-package

catnet: Categorical Bayesian Network Inference
cnDot-method

Network Description File
cnSearchOrder

Network Search for Given Node Order
cnSetProb-method

Set Probability from Data
cnSetSeed

Random Generator Seed
cnSearchHist

Parent Histogram Matrix
cnPredict-method

Prediction
dag2cpdag-method

Complete Network Representation
cnNumNodes-method

Network Size
cnFindAIC-method

Find Network by AIC
cnProb-method

Conditional Probability Structure
cnParHist-method

Parenthood Histogram
cnNodes-method

Netwok Nodes
cnSamples-method

Samples from Network
cnPlot-method

Plot Network
cnSubNetwork-method

Sub-Network
cnDiscretize

Data Categorization
cnNodeMarginalProb-method

Node Marginal Probability
cnNew

New catNetwork
CPDAG-class

Class CPDAG
cnCatnetFromGraph

catNetwork from Graph
cnMatParents-method

Network Parent Matrix
cnEntropy

Pairwise Node Entropy
isDAG

Check Direct Acyclic Graph (DAG) Condition
cnPearsonTest-method

Goodness of Fit Test
cnParents-method

Network Parent Structure
cnSearchSA

Stochastic Network Search
cnRandomCatnet

Random Network