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catnet (version 1.14.8)

Categorical Bayesian Network Inference

Description

Structure learning and parameter estimation of discrete Bayesian networks using likelihood-based criteria. Exhaustive search for fixed node orders and stochastic search of optimal orders via simulated annealing algorithm are implemented.

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Version

Install

install.packages('catnet')

Monthly Downloads

81

Version

1.14.8

License

GPL (>= 2)

Maintainer

Nikolay Balov

Last Published

February 4th, 2015

Functions in catnet (1.14.8)

cnSearchOrder

Network Search for Given Node Order
CPDAG-class

Class CPDAG
cnSearchHist

Parent Histogram Matrix
cnRandomCatnet

Random Network
isDAG

Check Direct Acyclic Graph (DAG) Condition
cnCatnetFromEdges

catNetwork from Edges
cnDot-method

Network Description File
classification

Classification demonstration
cnDiscretize

Data Categorization
cnSetSeed

Random Generator Seed
cnSearchSA

Stochastic Network Search
cnCompare-method

Network Comparison
cnFindBIC-method

Find Network by BIC
cnNumNodes-method

Network Size
breast

Breast cancer data
cnEntropy

Pairwise Node Entropy
cnNew

New catNetwork
cnPearsonTest-method

Goodness of Fit Test
catNetworkDistance-class

Class "catNetworkDistance"
dag2cpdag-method

Complete Network Representation
cnCatnetFromSif

Categorical Network from Simple Interaction File (SIF) and Bayesian Networks Interchange Format (BIF)
cnLoglik-method

Sample Log-likelihood
cnCluster-method

Network Clustering
catnet-package

catnet: Categorical Bayesian network inference
cnSamples-method

Samples from Network
cnFind-method

Find Network by Complexity
cnReorderNodes-method

Reorder Network Nodes
cnNodes-method

Netwok Nodes
cnEdges-method

Network Edges
cnNodeLoglik

Node Log-likelihood
novartis

Novartis multi-tissue data
cnNodeSampleLoglik

Node Log-likelihood
cnProb-method

Conditional Probability Structure
cnPlot-method

Plot Network
cnComplexity-method

Network Complexity
cnPredict-method

Prediction
cnSetProb-method

Set Probability from Data
cnSubNetwork-method

Sub-Network
cnNodeMarginalProb-method

Probability Calculations
cnOrder-method

Network Node Order
cnMatEdges-method

Network Edge Matrix
catNetwork-class

Class "catNetwork"
alarm

The ALARM network
cnMatParents-method

Network Parent Matrix
cnParHist-method

Parenthood Histogram
catNetworkEvaluate-class

Class "catNetworkEvaluate"
cnFindAIC-method

Find Network by AIC
cnParents-method

Network Parent Structure