flatten_xifti

Object of class "xifti". 
See <code><a rd-options="" href="/link/is.xifti?package=ciftiTools&version=0.1.6.0" data-mini-rdoc="ciftiTools::is.xifti">is.xifti</a></code> and <code><a rd-options="" href="/link/make_xifti?package=ciftiTools&version=0.1.6.0" data-mini-rdoc="ciftiTools::make_xifti">make_xifti</a></code>.

xifti

Should vertices for the medial wall be included with the
cortical data? If <code>NULL</code> (default), do not include them. If any other 
value, use that value to fill rows corresponding to the medial wall mask.

medial_wall

"alphabetical" (default) to match the Connectome 
Worbench command <code>-cifti-export-dense-mapping</code>, or "spatial" which is 
already the ordering used in the <code>"xifti"</code>.

subcort_order

Concatenates the data in a <code>"xifti"</code> object into a single matrix.

internal

CIFTI files contain brain imaging data in "gray-ordinates", which
represent the gray matter as cortical surface vertices (left and right) and
subcortical voxels (cerebellum, basal ganglia, and other deep gray matter).
'ciftiTools' uses the Connectome Workbench to read CIFTI files into R and
apply common pre-processing steps (e.g. smoothing, resampling). It also
provides tools for visualizing the cortical surface with GIFTI files, and
for visualizing the subcortical volume.

Amanda Mejia

ciftiTools

Tools for Reading and Visualizing CIFTI Brain Files

Damon Pham

flatten_xifti function

Object of class "xifti". 
See <code><a rd-options='' href='is.xifti'>is.xifti</a></code> and <code><a rd-options='' href='make_xifti'>make_xifti</a></code>.

flatten_xifti: Flatten a `"xifti"` object

Description

Usage

Arguments

Value

Details