header_cifti

File path of CIFTI-format data (ending in ".d*.nii").

cifti_fname

(Optional) Path to Connectome Workbench folder or executable. 
If not provided, should be set with 
<code>ciftiTools.setOption("wb_path", "path/to/workbench")</code>.

wb_path

Wrapper for Connectome Workbench command
 <code>-nifti-information [fname] -print-header</code>

internal

CIFTI files contain brain imaging data in "gray-ordinates", which
represent the gray matter as cortical surface vertices (left and right) and
subcortical voxels (cerebellum, basal ganglia, and other deep gray matter).
'ciftiTools' uses the Connectome Workbench to read CIFTI files into R and
apply common pre-processing steps (e.g. smoothing, resampling). It also
provides tools for visualizing the cortical surface with GIFTI files, and
for visualizing the subcortical volume.

Amanda Mejia

ciftiTools

Tools for Reading and Visualizing CIFTI Brain Files

Damon Pham

header_cifti function

This function uses a system wrapper for the 'wb_command' executable. The 
 user must first download and install the Connectome Workbench, available 
 from https://www.humanconnectome.org/software/get-connectome-workbench . 
 The <code>wb_path</code> argument is the full file path to the Connectome 
 Workbench folder. (The full file path to the 'wb_cmd' executable also 
 works.)

header_cifti: Get NIFTI header (of a CIFTI)

Description

Usage

Arguments

Value

Connectome Workbench Requirement