is.subcort_labs

The putative factor vector of brain substructures.

Check if object is a factor vector of subcortical structures.This is a helper
 function for <code><a rd-options="" href="/link/is.xifti?package=ciftiTools&version=0.1.6.0" data-mini-rdoc="ciftiTools::is.xifti">is.xifti</a></code>.

internal

CIFTI files contain brain imaging data in "gray-ordinates", which
represent the gray matter as cortical surface vertices (left and right) and
subcortical voxels (cerebellum, basal ganglia, and other deep gray matter).
'ciftiTools' uses the Connectome Workbench to read CIFTI files into R and
apply common pre-processing steps (e.g. smoothing, resampling). It also
provides tools for visualizing the cortical surface with GIFTI files, and
for visualizing the subcortical volume.

Amanda Mejia

ciftiTools

Tools for Reading and Visualizing CIFTI Brain Files

Damon Pham

is.subcort_labs function

<code>xifti$meta$subcort$labels</code> is a factor with the following levels:
<ol>
<li>Cortex-L</li>
<li>Cortex-R</li>
<li>Accumbens-L</li>
<li>Accumbens-R</li>
<li>Amygdala-L</li>
<li>Amygdala-R</li>
<li>Brain Stem</li>
<li>Caudate-L</li>
<li>Caudate-R</li>
<li>Cerebellum-L</li>
<li>Cerebellum-R</li>
<li>Diencephalon-L</li>
<li>Diencephalon-R</li>
<li>Hippocampus-L</li>
<li>Hippocampus-R</li>
<li>Pallidum-L</li>
<li>Pallidum-R</li>
<li>Putamen-L</li>
<li>Putamen-R</li>
<li>Thalamus-L</li>
<li>Thalamus-R</li>
</ol>These correspond to the same structures as given by 
 <code>ft_read_cifti</code> in the <code>cifti-matlab</code> MATLAB toolbox.

Label Levels

Check if object is a factor vector of subcortical structures.This is a helper
 function for <code><a rd-options='' href='is.xifti'>is.xifti</a></code>.

is.subcort_labs: Validate a factor vector of subcortical labels

Description

Usage

Arguments

Value

Label Levels

Details