cinaR (version 0.2.3)

heatmap_var_peaks: heatmap_var_peaks

Description

plot most variable k peaks (default k = 100) among all samples

Usage

heatmap_var_peaks(results, heatmap.peak.count = 100, ...)

Value

ggplot object

Arguments

results

cinaR result object

heatmap.peak.count

number of peaks to be plotted. If number of peaks are less than k then all peaks will be used.

...

additional arguments for heatmap function, for more info `?pheatmap`

Examples

library(cinaR)
data(atac_seq_consensus_bm) # calls 'bed'

# creating dummy results
results <- NULL
results[["cp"]] <- bed[,c(4:25)]

heatmap_var_peaks(results)