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clValid (version 0.6-2)
Validation of Clustering Results
Description
Statistical and biological validation of clustering results.
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Install
install.packages('clValid')
Monthly Downloads
1,989
Version
0.6-2
License
LGPL
Maintainer
Guy Brock
Last Published
January 25th, 2011
Functions in clValid (0.6-2)
Search functions
connectivity
Connectivity Measure
sota
Self-organizing Tree Algorithm (SOTA)
annotationListToMatrix
Change annotation list to matrix
plot.sota
Plot Function for a SOTA Object
BSI
Biological Stability Index
BHI
Biological Homogeneity Index
clValid-class
Class "clValid"
print.sota
Print Function for a SOTA Object
stability
Stability Measures
dunn
Dunn Index
clValid-internal
Internal clValid functions
getRanksWeights
Extract ranks and weights from clValid object
clValid
Validate Cluster Results
readAnnotationFile
Read in biological annotation files from external file
mouse
Mouse Mesenchymal Cells