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cnvGSA (version 1.10.0)
Gene Set Analysis of (Rare) Copy Number Variants
Description
This package is intended to facilitate gene-set association with rare CNVs in case-control studies.
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Version
Version
1.16.0
1.14.0
1.12.0
1.10.0
Version
1.10.0
License
LGPL
Maintainer
Robert Ziman
Last Published
February 15th, 2017
Functions in cnvGSA (1.10.0)
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readParamsRFile
Read cnvGSA parameters from a file (R format)
summary-methods
cnvGSA methods for function
summary
getCnvGenes
Determine genes hit by CNVs
CnvGSAOutput-class
Class
"CnvGSAOutput"
cnvGSA-package
Gene-Set Analysis of (Rare) Copy Number Variants
cnvGSAexportBurdenStats
Export burden statistics
cnvGSAFisher
CNV/gene-set association using Fisher Exact Test
CnvGSAInput-class
Class
"CnvGSAInput"
readGVF
Read CNVs from a .gvf file
readGMT
Read gene-sets from a .gmt file
