CosMx_subset

<p>This is a toy CosMix spatial transcriptomics data.</p>

A spatially-aware cell clustering algorithm is provided with cluster significance assessment. It comprises four key modules: spatially-aware cell-gene co-embedding, cell clustering, signature gene identification, and cluster significant assessment. More details can be referred to Peng Xie, et al. (2025) <doi:10.1016/j.cell.2025.05.035>.

Wei Liu

coFAST

Spatially-Aware Cell Clustering Algorithm with Cluster
Significant Assessment

Xiao Zhang

Yi Yang

Peng Xie

Chengqi Lin

Jin Liu

CosMx_subset function

A CosMix spatial transcriptomics data — CosMx_subset

A CosMix spatial transcriptomics data

CosMx_subset: A CosMix spatial transcriptomics data

Description

Arguments

Examples