cobindR (version 1.10.0)

pairs_of_interest: pairs_of_interest of cobindr object

Description

pairs_of_interest of cobindr object.

Usage

"pairs_of_interest"(x)
"pairs_of_interest"(x) <- value

Arguments

x

a cobindr object

value

factors specifying the motif pairs that are to be evaluated

Value

pairs_of_interest (factor)

See Also

uid,name,sequences,bg_sequences,desc,configuration,binding_sites,bg_binding_sites,pfm,pairs,bg_pairs,pairs_of_interest

Examples

cfg <- cobindRConfiguration()
sequence_type(cfg) <- 'fasta'
sequence_source(cfg) <- system.file('extdata/sox_oct_example_vignette_seqs.fasta',package='cobindR')
sequence_origin(cfg) <- 'Mouse Embryonic Stem Cell Example ChIP-Seq Oct4 Peak pairs_of_interest'
cbr <- cobindr(cfg)
pairs_of_interest(cbr)