Learn R Programming

copyseparator (version 1.2.0)

Assembling Long Gene Copies from Short Read Data

Description

Assembles two or more gene copies from short-read Next-Generation Sequencing data. Works best when there are only two gene copies and read length >=250 base pairs. High and relatively even coverage are important.

Copy Link

Version

Install

install.packages('copyseparator')

Monthly Downloads

205

Version

1.2.0

License

GPL-2

Issues

Pull Requests

Stars

Forks

Maintainer

Lei Yang

Last Published

November 25th, 2022

Functions in copyseparator (1.2.0)

sep_assem

sep_assem
copy_validate

copy_validate
subset_downsize

subset_downsize
copy_assemble

copy_assemble
copy_separate

copy_separate
copy_detect

copy_detect