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cvplogistic (version 2.0-0)

Majorization Minimization by Coordinate Descent Algorithm for Concave Penalized Logistic Regression for High Dimensional Data

Description

The package uses majorization minimization by coordinate descent (MMCD) algorithm to compute the solution surface for concave penalized logistic regression models. The SCAD and MCP (default) are two concave penalties considered in this implementation. The package provides three types of solutions surfaces, one computed along the regulation parameter kappa (default), the one along the penalty parameter lambda, and the one computed using a hybrid algorithm. The package also provides three tuning parameter selection methods, one based on AIC, one based on BIC and one based on k-fold cross-validated area under ROC curve. Other algorithms such as the adaptive rescaling approach and local linear approximation approach are also provided for the MCP penalty as optional choices.

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Version

Install

install.packages('cvplogistic')

Monthly Downloads

12

Version

2.0-0

License

GPL (>= 2)

Maintainer

Dingfeng Jiang

Last Published

May 7th, 2012

Functions in cvplogistic (2.0-0)

cvauc.cvplogistic

Tuning parameter selection by cross-validated area under ROC curve (CVAUC) criteria for a concave penalized logistic regression
cvplogistic

Majorization minimization by coordinate descent for concave penalized logistic regression
aic.cvplogistic

Tuning parameter selection by AIC criteria for a concave penalized logistic regression
bic.cvplogistic

Tuning parameter selection by BIC criteria for a concave penalized logistic regression