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dclone (version 1.2-0)

Data Cloning and MCMC Tools for Maximum Likelihood Methods

Description

Low level functions for implementing maximum likelihood estimating procedures for complex models using data cloning and Bayesian Markov chain Monte Carlo methods with support for JAGS, WinBUGS and OpenBUGS, with support for parallel computing.

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Version

Install

install.packages('dclone')

Monthly Downloads

470

Version

1.2-0

License

GPL-2

Homepage

http://cran.r-project.org/package=dclone

Maintainer

Peter Solymos

Last Published

August 28th, 2010

Functions in dclone (1.2-0)

clusterSeed

Parallel random seeds and kinds

clusterSize

Optimizing the number of workers

ovenbird

Abundances of ovenbird in Alberta

regmod

Exemplary MCMC list object

jags.fit

Fit JAGS models with cloned data

bugs.fit

Fit BUGS models with cloned data

Write and remove model file

update.mcmc.list

Automatic updating of an MCMC object

dc.parfit

Parallel model fitting with data cloning

coef.mcmc.list

Methods for the 'mcmc.list' class

errlines

Plot error bars

jags.parfit

Parallel computing with JAGS

dc.fit

Iterative model fitting with data cloning

dctable

Retrieve descriptive statistics from fitted objects to evaluate convergence

dclone-package

Data Cloning

snowWrapper

Parallel wrapper function to call from within a function

mcmcapply

Calculations on 'mcmc.list' objects

lambdamax.diag

Maximum Eigenvalue of the Posterior Variance-Covariance Matrix

dclone

Cloning R objects

make.symmetric

Make a square matrix symmetric by averaging.