deTS (version 1.0)

ENCODE_z_score: ENCODE z-score to define tissue-specific genes

Description

ENCODE z-score matrix to define tissue-specific genes

Usage

data("ENCODE_z_score")

Format

A data frame with z-score of 14031 genes in 44 ENCODE tissues.

Row is genes symbol and column is tissue names.

Adrenal Gland Body of Pancreas Breast Epithelium Camera-type Eye Cerebellum

C1orf112 -0.674 -0.440 -0.246 3.892 1.333

FGR -0.078 -0.345 0.159 -0.354 -0.407

CFH -0.093 -0.365 -0.134 -0.133 -0.160

FUCA2 3.028 1.467 0.040 0.228 -0.601

NFYA -0.637 -0.872 0.053 2.364 0.619

Details

nothing

References

Pei G., Dai Y., Zhao Z., Jia P. (2019) deTS: Tissue-Specific Enrichment Analysis to decode tissue specificity. Bioinformatics, In submission.

Examples

# NOT RUN {
data(ENCODE_z_score)
# }