deTS (version 1.0)

GTEx_t_score: GTEx t-score to define tissue-specific genes

Description

GTEx t-score matrix to define tissue-specific genes

Usage

data("GTEx_t_score")

Format

A data frame with t-score of 14725 genes in 47 GTEx tissues.

Row is genes symbol and column is tissue names.

Adipose - Subcutaneous Adipose - Visceral (Omentum) Adrenal Gland Artery - Aorta Artery - Coronary

OR4F5 -0.524 -0.597 0.134 -1.109 -0.588

SAMD11 -9.921 -1.734 3.633 3.595 0.017

KLHL17 -6.812 -4.553 -3.084 -0.744 0.494

PLEKHN1 -7.785 -6.882 -3.915 -6.570 -4.892

C1orf170 -7.113 -6.257 -4.465 -5.897 -4.004

Details

nothing

References

Pei G., Dai Y., Zhao Z., Jia P. (2019) deTS: Tissue-Specific Enrichment Analysis to decode tissue specificity. Bioinformatics, In submission.

Examples

# NOT RUN {
data(GTEx_t_score)
# }