genomeRegions

Candidate Differentially Expressed Regions (DERs) for the example data. For more information check <a href="/link/calculatePvalues?package=derfinder&version=1.6.4" rd-options="" data-mini-rdoc="derfinder::calculatePvalues">calculatePvalues</a>.

datasets

This package provides functions for annotation-agnostic
    differential expression analysis of RNA-seq data. Two implementations of
    the DER Finder approach are included in this package: (1) single base-level
    F-statistics and (2) DER identification at the expressed regions-level.
    The DER Finder approach can also be used to identify differentially bounded
    ChIP-seq peaks.

Leonardo Collado-Torres

derfinder

Annotation-agnostic differential expression analysis of RNA-seq data at
    base-pair resolution via the DER Finder approach

genomeRegions function

Candidate Differentially Expressed Regions (DERs) for the example data. For more information check <a href="calculatePvalues" rd-options="">calculatePvalues</a>.

genomeRegions: Candidate DERs for example data

Description

Arguments

See Also