genomicState

Pre-computed genomic state for Hsapiens UCSC hg19 knownGene annotation built 
using <a href="/link/makeGenomicState?package=derfinder&version=1.6.4&to=derfinder" rd-options="derfinder" data-mini-rdoc="derfinder::makeGenomicState">makeGenomicState</a> for 
TxDb.Hsapiens.UCSC.hg19.knownGene version 2.14.0. The object has been subset 
for chr21 only.

datasets

This package provides functions for annotation-agnostic
    differential expression analysis of RNA-seq data. Two implementations of
    the DER Finder approach are included in this package: (1) single base-level
    F-statistics and (2) DER identification at the expressed regions-level.
    The DER Finder approach can also be used to identify differentially bounded
    ChIP-seq peaks.

Leonardo Collado-Torres

derfinder

Annotation-agnostic differential expression analysis of RNA-seq data at
    base-pair resolution via the DER Finder approach

genomicState function

Pre-computed genomic state for Hsapiens UCSC hg19 knownGene annotation built 
using <a href="makeGenomicState" rd-options="derfinder">makeGenomicState</a> for 
TxDb.Hsapiens.UCSC.hg19.knownGene version 2.14.0. The object has been subset 
for chr21 only.

genomicState: Genomic State for Hsapiens.UCSC.hg19.knownGene

Description

Arguments

See Also