"count_test"Objects of this class are created by test_counts.
# S4 method for count_test
summary(object)# S4 method for count_test
coef(object)
# S4 method for count_test
show(object)
# S4 method for count_test,ANY
plot(x, aggregate = FALSE, nice = TRUE)
of class count_test.
object of class count_test.
logical, if TRUE experiments are aggregated according
to their group.
logical, if TRUE a more aesthetically pleasing (but harder to
customize) version of the plot is created.
summary: Summary statistics of assigned groups.
coef: Extract coefficients of groups.
show: Print both group_coef and test_res.
plot: plots mean number of molecules per partition and its
confidence intervals.
"data.frame" containing experiments, groups to which they
belong and calculated values of rate (lambda).
"matrix" containing result of multiple comparisions t-test.
"character" name of GLM used to compare experiments.
Michal Burdukiewicz.
In case of the aggregated plot, mean confidence intervals for groups are presented as dashed lines.
test_counts.