read_dpcr

Reads digital PCR data in various formats.

utilities

Analysis, visualisation and simulation of digital polymerase chain
reaction (dPCR) (Burdukiewicz et al. (2016) <doi:10.1016/j.bdq.2016.06.004>).
Supports data formats of commercial systems (Bio-Rad QX100 and
QX200; Fluidigm BioMark) and other systems.

Andrej-Nikolai Spiess

dpcR

Digital PCR Analysis

Michal Burdukiewicz

Stefan Roediger

Bart Jacobs

Piotr Sobczyk

read_dpcr function

<dl><dt>input</dt>
<dd>name of the input file (<code>character</code>) or input object 
(<code>data.frame</code>).</dd>
<dt>format</dt>
<dd>of the file, for example: <code>"raw"</code>, <code>"QX100"</code>, 
<code>"BioMark"</code>, <code>"amp"</code> (raw amplitude compressed using <code>.zip</code>).</dd>
<dt>ext</dt>
<dd>extension of the file ().</dd>
<dt>...</dt>
<dd>additional parameters for the appropriate function. For example, if 
<code>format</code> has value <code>"raw"</code>, the additional parameter must be 
<code>adpcr</code>.</dd></dl>

Arguments

Michal Burdukiewcz, Stefan Roediger

Author

Read digital PCR data — read_dpcr

<dl>

<dt>input</dt>
<dd>name of the input file (<code>character</code>) or input object 
(<code>data.frame</code>).</dd>


<dt>format</dt>
<dd>of the file, for example: <code>"raw"</code>, <code>"QX100"</code>, 
<code>"BioMark"</code>, <code>"amp"</code> (raw amplitude compressed using <code>.zip</code>).</dd>


<dt>ext</dt>
<dd>extension of the file ().</dd>


<dt>...</dt>
<dd>additional parameters for the appropriate function. For example, if 
<code>format</code> has value <code>"raw"</code>, the additional parameter must be 
<code>adpcr</code>.</dd>

</dl>

read_dpcr: Read digital PCR data

Description

Usage

Value

Arguments

Author

Details

See Also