FDR:
Identification of enriched regions by controlling a given FDR level
Description
Identify enriched regions by controlling false discovery rate at a specified level.
Usage
FDR(prob0, cr = 0.05)
Arguments
prob0
A numeric vector. The probability of the null hypothesis being true (i.e. a region not-enriched).
cr
A numeric variable. The level of FDR for identifying the enriched regions.
Value
X
The index of enriched regions (1: enriched, 0: not-enriched).
References
Bao et al. Accounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data. BMC Bioinformatics 2013, 14:169 DOI:10.1186/1471-2105-14-169.