enRich (version 3.1)

FDR: Identification of enriched regions by controlling a given FDR level

Description

Identify enriched regions by controlling false discovery rate at a specified level.

Usage

FDR(prob0, cr = 0.05)

Arguments

prob0

A numeric vector. The probability of the null hypothesis being true (i.e. a region not-enriched).

cr

A numeric variable. The level of FDR for identifying the enriched regions.

Value

X

The index of enriched regions (1: enriched, 0: not-enriched).

References

Bao et al. Accounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data. BMC Bioinformatics 2013, 14:169 DOI:10.1186/1471-2105-14-169.

See Also

See also mix, mix.joint, enrich.mix