Detection of enriched and differentially bound regions for fitting results of mix and mix.joint.
Example Data
Joint fitting of mixture of Poisson or NB densities to ChIP-seq experiments.
Joint fitting of a one-dimensional Markov random field model to multiple ChIP-seq datasets.
Detection of enriched and differentially bound regions for fitting results of mrf and mrf.joint.
Analysis of multiple ChIP-seq data.
Estimating the ImmunoPrecipitation (IP) efficiency of a ChIP-seq experiment.
Fitting mixture of two densities, either Poisson or Negative Binomial, to ChIP-seq data.
Identification of enriched regions by controlling a given FDR level
Fitting a one-dimensional Markov random field mixture model to ChIP-seq data.
Example Data