Learn R Programming

⚠️There's a newer version (16.3) of this package.Take me there.

fields (version 6.8)

Tools for spatial data

Description

Fields is for curve, surface and function fitting with an emphasis on splines, spatial data and spatial statistics. The major methods include cubic, and thin plate splines, Kriging and compact covariances for large data sets. The splines and Kriging methods are supporting by functions that can determine the smoothing parameter (nugget and sill variance) by cross validation and also by restricted maximum likelihood. A major feature is that any covariance function implemented in R with the (simple) fields format can be used for spatial prediction. Some tailored optimization functions are supplied for finding the MLEs for the Matern family of covariances. There are also many useful functions for plotting and working with spatial data as images. This package also contains an implementation of sparse matrix methods for large data sets and currently requires the sparse matrix (spam) package for testing and use with large data sets. But spam is not required for the standard spatial functions. Use help(fields) to get started and for an overview. The fields source code is heavily commented and provides useful explanations of numerical details in addition to the manual pages.

Copy Link

Version

Install

install.packages('fields')

Monthly Downloads

52,628

Version

6.8

License

GPL (>= 2)

Maintainer

Douglas Nychka

Last Published

July 19th, 2013

Functions in fields (6.8)

as.image

Creates image from irregular x,y,z
bplot

boxplot
add.image

Adds an image to an existing plot.
Wendland

Wendland family of covariance functions and supporting numerical functions
fields testing scripts

Testing fields functions
flame

Response surface experiment ionizing a reagent
Krig.Amatrix

Smoother (or "hat") matrix relating predicted values to the dependent (Y) values.
US

Plot of the US with state boundaries
fields exported FORTRAN

FORTRAN subroutines used in fields functions
predict.derivative

Predicted derivatives
rat.diet

Experiment studying an appetite supressant in rats.
ozone2

Daily 8-hour ozone averages for sites in the Midwest
lennon

Gray image of John Lennon.
US.dat

Outline of coterminous US and states.
ozone

Data set of ozone measurements at 20 Chicago monitoring stations.
vgram.matrix

Computes a variogram from an image
summary.Krig

Summary for Krig spatial process estimate
arrow.plot

Adds arrows to a plot
RCMexample

3-hour precipitation fields from a regional climate model
world

Plot of the world
drape.plot

Perspective plot draped with colors in the facets.
interp.surface

Fast bilinear interpolator from a grid.
splint

Cubic spline interpolation
set.panel

Specify a panel of plots
mKrig.MLE

Maximizes likelihood for the process marginal variance (rho) and nugget standard deviation (sigma) parameters (e.g. lambda) over a list of covariance models or a grid of covariance parameter values.
qsreg

Quantile or Robust spline regression
Krig.null.function

Default function to create fixed matrix part of spatial process model.
as.surface

Creates an "surface" object from grid values.
The Engines:

Basic linear algebra utilities and other computations supporting the Krig function.
sim.Krig

Conditional simulation of a spatial process
print.Krig

Print kriging fit results.
tim.colors

Some useful color tables for images and tools to handle them.
CO2

Simulated global CO2 observations
BD

Data frame of the effect of buffer compositions on DNA strand displacement amplification. A 4-d regression data set with with replication. This is a useful test data set for exercising function fitting methods.
colorbar.plot

Adds color scale strips to an existing plot.
gcv.Krig

Finds profile likelihood and GCV estimates of smoothing parameters for splines and Kriging.
predict.se

Standard errors of predictions
image2lz

Some simple functions for subsetting images
stats.bin

Bins data and finds some summary statistics.
QTps

Robust and Quantile smoothing using a thin-plate spline
Colorado Monthly Meteorological Data

Monthly surface meterology for Colorado 1895-1997
fields.grid

Using MKrig for predicting on a grid.
ribbon.plot

Adds to an existing plot, a ribbon of color, based on values from a color scale, along a sequence of line segments.
fields-stuff

Fields supporting functions
pushpin

Adds a "push pin" to an existing 3-d plot
plot.Krig

Diagnostic and summary plots of a Kriging or spline object
Exponential, Matern, Radial Basis

Covariance functions
smooth.2d

Kernel smoother for irregular 2-d data
summary.ncdf

Summarizes a netCDF file handle
WorldBankCO2

Carbon emissions and demographic covariables by country for 1999.
vgram

Finds a traditional or robust variogram for spatial data.
grid list

Some simple functions for working with gridded data and the grid format (grid.list) used in fields.
Covariance functions

Exponential family, radial basis functions,cubic spline, compactly supported Wendland family and stationary covariances.
RMprecip

Monthly total precipitation (mm) for August 1997 in the Rocky Mountain Region and some gridded 4km elevation data sets (m).
predict.surface

Evaluates a fitted function or its standard errors as a surface object
yline

Draw horizontal lines
minitri

Mini triathlon results
predict.Krig

Evaluation of Krig spatial process estimate.
spam2lz

Conversion of formats for sparse matrices
sim.rf

Simulates a random field
fields internal

Fields internal and secondary functions
poly.image

Image plot for cells that are irregular quadrilaterals.
image.smooth

Kernel smoother for irregular 2-d data
stats

Calculate summary statistics
plot.surface

Plots a surface
rdist

Euclidean distance matrix
mKrig

"micro Krig" Spatial process estimate of a curve or surface, "kriging" with a known covariance function.
cover.design

Computes Space-Filling "Coverage" designs using Swapping Algorithm
NorthAmericanRainfall

Observed North American summer precipitation from the historical climate network.
image.cov

Exponential, Matern and general covariance functions for 2-d gridded locations.
image.plot

Draws image plot with a legend strip for the color scale based on either a regular grid or a grid of quadrilaterals.
xline

Draw a vertical line
REML.test

Maximum Likelihood estimates for some Matern covariance parameters.
fields

fields - tools for spatial data
surface.Krig

Plots a surface and contours
transformx

Linear transformation
quilt.plot

Image plot for irregular spatial data.
rdist.earth

Great circle distance matrix
predict.se.Krig

Standard errors of predictions for Krig spatial process estimate
fields.hints

fields - graphics hints
sreg

Smoothing spline regression
bplot.xy

Boxplots for conditional distribution
Tps

Thin plate spline regression
Krig

Kriging surface estimate