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flowPlots (version 1.20.0)

flowPlots: analysis plots and data class for gated flow cytometry data

Description

Graphical displays with embedded statistical tests for gated ICS flow cytometry data, and a data class which stores "stacked" data and has methods for computing summary measures on stacked data, such as marginal and polyfunctional degree data.

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Version

Version

1.20.0

License

Artistic-2.0

Maintainer

N Hawkins

Last Published

February 15th, 2017

Functions in flowPlots (1.20.0)

profileData-methods

Method profileData from Class "StackedData"
pfdDF

An example of pfdData
computePFDPartsData-methods

Method computePFDPartsData from Class "StackedData"
computeMarkers-methods

Method computeMarkers from Class "StackedData"
pfdPartsList

An example of pfdPartsData
computeMarginalData-methods

Method computeMarginalData from Class "StackedData"
pfdData-methods

Method pfdData from Class "StackedData"
adultsNeonates

The adultsNeonates example data set of "stacked" data.
legendPFDStatsGroupNames

Create Group Names With Embedded Stats to Use in a Plot Legend
markers-methods

Method markers from Class "StackedData"
makeDataList

Prepare Data in a Data Frame for a Call to GroupListBoxplot()
readStackedData-methods

Method readStackedData from Class "StackedData"
marginalDF

An example of marginalData
markerMatrix

An example of the markers data.
profileDF

An example of profileData
StackedData-class

Class "StackedData"
computePFDGroupStatsList

Compute Group Stats on PFD Data to Be Used In a Legend
makeBarplotData

Prepare Profile Data for a Call to Barplot()
GroupListBoxplot

A Boxplot Function With Embedded Statistical Tests for Comparing Groups
computePFDData-methods

Method computePFDData from Class "StackedData"
stackedData-methods

Method stackedData from Class "StackedData"
marginalData-methods

Method marginalData from Class "StackedData"
pfdPartsData-methods

Method pfdPartsData from Class "StackedData"
computeProfileData-methods

Method computeProfileData from Class "StackedData"
makeTernaryData

Prepare PFD Data for a Call to ternaryplot()