flowSet
as input and
creates all necessary output for a 'BoundaryPlot' type QA
process. Objects created by this function can be laid out as HTML
using writeQAReport
.
qaProcess.BoundaryPlot(flowList,dyes=NULL,
outdir="QAReport",cutoff=3,sum.dimensions=NULL,
det.dimensions=NULL,pdf=TRUE,name="Boundary",
side="both",...)
flowSet
flowSet
are identified and compared."character"
. The margin
on which to evaluate the filter. Either upper
for the
upper margin or lower
for the lower margin or both
for both margins. qaProcess
.qaProcess
objects to
HTML, see writeQAReport
and
qaReport
.
writeQAReport
,
qaReport
,
qaProcess
,
qaProcess.DensityPlot
,
qaProcess.ECDFPlot
data(qData)
dest <- tempdir()
resBoundary <- qaProcess.BoundaryPlot(qData, dyes=c("FSC-A","CD3"),
outdir=dest, cutoff=3, pdf=TRUE)
resBoundary
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