recon_all

infile

outdir

subjid

verbose

opts

arguments passed to <code><a rd-options="" href="/link/reconner?package=freesurfer&version=1.6.8" data-mini-rdoc="freesurfer::reconner">reconner</a></code>

Reconstruction from Freesurfer for All Steps

Wrapper functions that interface with 'Freesurfer'
<https://surfer.nmr.mgh.harvard.edu/>, a powerful and
commonly-used 'neuroimaging'
software, using system commands. The goal is to be able to interface with
'Freesurfer' completely in R, where you pass R objects of class 'nifti',
implemented by package 'oro.nifti', and the function executes an 'Freesurfer'
command and returns an R object of class 'nifti' or necessary output.

John Muschelli

freesurfer

Wrapper Functions for 'Freesurfer'

Athanasia Mo Mowinckel

recon_all function

arguments passed to <code><a rd-options='' href='reconner'>reconner</a></code>

recon_all: Reconstruction from Freesurfer for All Steps

Description

Usage

Arguments

Value