G3Lollipop plot options
g3Lollipop.options(chart.width = 800, chart.type = "pie",
chart.margin = list(left = 40, right = 20, top = 15, bottom = 25),
chart.background = "transparent", transition.time = 600,
y.axis.label = "mutations", axis.label.font = "normal 12px Arial",
axis.label.color = "#4f4f4f", axis.label.alignment = "middle",
axis.label.dy = "-2em", legend.margin = list(left = 10, right = 0,
top = 5, bottom = 5), legend.interactive = TRUE, legend.title = NA,
lollipop.track.height = 420,
lollipop.track.background = "rgb(244,244,244)",
lollipop.pop.min.size = 2, lollipop.pop.max.size = 12,
lollipop.pop.info.limit = 8, lollipop.pop.info.color = "#EEE",
lollipop.line.color = "rgb(42,42,42)", lollipop.line.width = 0.5,
lollipop.circle.color = "wheat", lollipop.circle.width = 0.5,
lollipop.label.ratio = 1.4, lollipop.label.min.font.size = 10,
lollipop.color.scheme = "accent", title.text = "",
title.font = "normal 16px Arial", title.color = "#424242",
title.alignment = "middle", title.dy = "0.35em", anno.height = 30,
anno.margin = list(top = 4, bottom = 0),
anno.background = "transparent", anno.bar.fill = "#e5e3e1",
anno.bar.margin = list(top = 2, bottom = 2),
domain.color.scheme = "category10", domain.margin = list(top = 0,
bottom = 0), domain.text.font = "normal 11px Arial",
domain.text.color = "#f2f2f2", legend = TRUE, tooltip = TRUE,
brush = TRUE, zoom = TRUE)chart width. Default 800.
pie or circle. Default pie.
specify chart margin in _list_ format.
Default list(left = 40, right = 20, top = 15, bottom = 25).
chart background. Default transparent.
chart animation transition time in millisecond. Default 600.
Y-axis label text. Default mutations.
css font style shorthand (font-style font-variant font-weight font-size/line-height font-family). Default "normal 12px Arial".
axis label text color. Default #4f4f4f.
axis label text alignment (start/end/middle). Default middle.
text adjustment of axis label text. Default -2em.
legend margin in list. Default list(left = 10, right = 0, top = 5, bottom = 5).
legend interactive mode. Default TRUE.
legend title. If NA, use factor.col. Default is NA.
height of lollipop track. Default 420.
background of lollipop track. Default rgb(244,244,244)
lollipop pop minimal size. Default 2.
lollipop pop maximal size. Default 12.
threshold of lollipop pop size to show count information in middle of pop. Default 8.
lollipop pop information text color. Default #EEE.
lollipop line color. Default rgb(42,42,42).
lollipop line width. Default 0.5.
lollipop circle border color. Default wheat.
lollipop circle border width. Default 0.5.
lollipop click-out label font size to circle size ratio. Default 1.4.
lollipop click-out label minimal font size. Default 10.
color scheme to fill lollipop pops. Default accent.
title of chart. Default is empty.
font of chart title. Default normal 16px Arial.
color of chart title. Default #424242.
text alignment of chart title (start/middle/end). Default middle.
text adjustment of chart title. Default 0.35em.
height of protein structure annotation track. Default 30.
margin of protein structure annotation track. Default list(top = 4, bottom = 0).
background of protein structure annotation track. Default transparent.
background of protein bar in protein structure annotation track. Default #e5e3e1.
margin of protein bar in protein structure annotation track. Default list(top = 2, bottom = 2).
color scheme of protein domains. Default category10.
margin of protein domains. Default list(top = 0, bottom = 0).
domain label text font in shorthand format. Default normal 11px Arial.
domain label text color. Default #f2f2f2.
if show legend. Default TRUE.
if show tooltip. Default TRUE.
if show brush. Default TRUE.
if enable zoom feature. Default TRUE.
a list with g3Lollipop plot options