genefilter (version 1.54.2)

eSetFilter: A function to filter an eSet object

Description

Given a Bioconductor's ExpressionSet object, this function filters genes using a set of selected filters.

Usage

eSetFilter(eSet)
getFilterNames()
getFuncDesc(lib = "genefilter", funcs = getFilterNames())
getRdAsText(lib)
parseDesc(text)
parseArgs(text)
showESet(eSet)
setESetArgs(filter)
isESet(eSet)

Arguments

eSet

eSet an ExpressionSet object

lib

lib a character string for the name of an R library where functions of interests reside

funcs

funcs a vector of character strings for names of functions of interest

text

text a character of string from a filed (e. g. description, argument, ..) filed of an Rd file for a fucntion

filter

filter a character string for the name of a filter function

Value

• A logical vector of length equal to the number of rows of 'expr'. The values in that vector indicate whether the corresponding row of 'expr' passed the set of filter functions.

Details

A set of filters may be selected to filter genes in through each of the filters in the order the filters have been selected

See Also

genefilter

Examples

if( interactive() ) {
   data(sample.ExpressionSet)      
   res <- eSetFilter(sample.ExpressionSet)
 }