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geneplotter (version 1.48.0)
Graphics related functions for Bioconductor
Description
Functions for plotting genomic data
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1.50.0
1.48.0
1.46.0
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Version
1.48.0
License
Artistic-2.0
Maintainer
Bioconductor Package Maintainer
Last Published
January 1st, 1970
Functions in geneplotter (1.48.0)
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amplicon.plot
Create an amplicon plot
alongChrom
A function for plotting expression data from an ExpressionSet for a given chromosome.
expressionSet133a
A small dataset for testing
cScale
A function for mapping chromosome length to a number of points.
make.chromOrd
Make a chromOrd object
Makesense
Produce Smoothed Sense/Anti-sense For All Chromosomes
cColor
A function for marking specific probes on a cPlot.
cPlot
A plotting function for chromosomes.
plotMA-methods
Generate an MA plot
savepng
Save the contents of the current graphics device to a file
GetColor
A function to get the Red-Blue color scheme used by dChip
groupedHeatmap
Heatmap of a matrix with grouped rows and columns
openHtmlPage
Open and close an HTML file for writing.
multiecdf
Multiple empirical cumulative distribution functions (ecdf) and densities
histStack
Stacked histogram
imageMap-methods
Write an HTML IMG tag together with a MAP image map.
plotChr
Plot Smoothed Sense/Anti-sense of Specified Chromosomes
plotExpressionGraph
A function to plot a graph colored by expression data