basic_info

Allele and genotype frequencies per locus and per sample. See <a href="/link/this%20section?package=genepop&version=1.2.2" data-mini-rdoc="genepop::this section">this section</a> of the Genepop executable documentation for more information on the statistical methods.

Makes the Genepop software available in R. This software implements a mixture of traditional population genetic methods and some more focused developments: it computes exact tests for Hardy-Weinberg equilibrium, for population differentiation and for genotypic disequilibrium among pairs of loci; it computes estimates of F-statistics, null allele frequencies, allele size-based statistics for microsatellites, etc.; and it performs analyses of isolation by distance from pairwise comparisons of individuals or population samples.

Franois Rousset

genepop

Population Genetic Data Analysis Using Genepop

François Rousset

Jimmy Lopez

Alexandre Genin

Khalid Belkhir

basic_info function

<dl><dt>inputFile</dt>
<dd>The path of the input file, in Genepop format</dd>
<dt>outputFile</dt>
<dd>character: The path of the output file</dd>
<dt>verbose</dt>
<dd>logical: whether to print some information</dd></dl>

Arguments

Allele and genotype frequencies per locus and per sample. See <a href='../doc/all-menu-options.html#sub-option-1-allele-and-genotype-frequencies'>this section</a> of the Genepop executable documentation for more information on the statistical methods.

Allele and genotype frequencies — basic_info

<dl>

<dt>inputFile</dt>
<dd>The path of the input file, in Genepop format</dd>


<dt>outputFile</dt>
<dd>character: The path of the output file</dd>


<dt>verbose</dt>
<dd>logical: whether to print some information</dd>

</dl>

basic_info: Allele and genotype frequencies

Description

Usage

Value

Arguments

Examples