genoPlotR (version 0.7)

mauve_bbone: Mauve backbone of 4 Bartonella genomes

Description

The result of a multiple genome alignment with Mauve.

Usage

data(mauve_bbone)

format

bbone, a list of two dataframes, representing the regions which are conserved in at least two genomes:

• dna_segs

{which is a list of 4 dna_seg objects, containing the mauve blocks for each genome.} comparisons{which is a list of 3 comparison objects.}

code

read_mauve_backbone

References

Mauve: http://asap.ahabs.wisc.edu/mauve/

Examples

data(mauve_bbone)
plot_gene_map(bbone$dna_segs, bbone$comparisons)