Learn R Programming

ggmotif (version 0.2.1)

Extract and Visualize Motif Information from MEME Software

Description

Extract and visualize motif information from XML file from MEME software. In biology, a motif is a nucleotide or amino acid sequence pattern that is widespread and usually assumed to be related to specifical biological functions. There exist many software was used to discover motif sequences from a set of nucleotide or amino acid sequences. MEME is almost the most used software to detect motif. It's difficult for biologists to extract and visualize the location of a motif on sequences from the results from MEME software.

Copy Link

Version

Install

install.packages('ggmotif')

Monthly Downloads

9

Version

0.2.1

License

Artistic-2.0

Maintainer

Xiang LI

Last Published

August 11th, 2022

Functions in ggmotif (0.2.1)

getMotifFromMEME

Extract and Visualize Motif Information from MEME Software
motifLocation

Extract and Visualize Motif Information from MEME Software